Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010369.1_349_430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

349 - 430

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

CGGGTCTCAGCC

Flanking Amino Acid:

LEILDRYLLKVNNLIWHVRC

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

77.4

0.62

0.8

72.5

32.2

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

43.1

-0.5

1.8

46.45

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029874

Chromosome:

PEDO01010369.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046276

21 - 1356

1336