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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010390.1_7278_7355_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7278 - 7355

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

CGCTGCCCGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCACCCTCACCC

Flanking Amino Acid:

RTSFTAEQLQVMQAQFAQDN

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

59.2

0.21

50.4

39.4

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

49.5

-0

1.9

61.11

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027141

Chromosome:

PEDO01010390.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021942

3588 - 8124

4537