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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010409.1_267_506_F

Intron Information:

Intron Rank:

142472

Intron Class:

major

Intron Phase:

Intron Coordinates:

267 - 506

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CCTCATCTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

82.3

32.2

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

77.7

0.62

0.8

73.7

31.3

Minor 5ss

43.4

-0.7

3.1

60.6

44.5

Minor BPS

47.4

-0.2

1.8

58.21

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026753

Chromosome:

PEDO01010409.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044071

21 - 2231

2211