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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010411.1_1803_1928_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1803 - 1928

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCACGCC

5'SS Class:

weak_major

3'SS Sequence:

CGCCTCGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCCT

U12 Branch Point Sequence:

TCGCCTCGGAGG

Flanking Amino Acid:

VPCSLLRHRQAGKAAGEGGG

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.4

51.7

40.6

Major BPS

28.6

-1.3

4.2

66.4

42.2

Major PPT

43.4

-0.3

1.7

42.4

37.3

Minor 5ss

31.3

-2.1

3.4

42.8

44.3

Minor BPS

37.1

-1.1

1.9

36.88

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021798

Chromosome:

PEDO01010411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029268

329 - 2465

2137