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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010515.1_2019_3249_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2019 - 3249

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTACGAAC

5'SS Class:

weak_major

3'SS Sequence:

CGCTGTGAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

GCGCTGTGAACC

Flanking Amino Acid:

MQNPHGLGGLFVNGRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.4

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

55.3

0.12

1.1

44.1

Minor 5ss

-1.8

36.1

40.8

Minor BPS

43.2

-0.5

2.1

48.78

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025725

Chromosome:

PEDO01010515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034532

2001 - 3869

1869