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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010515.1_3666_4550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3666 - 4550

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

CTCCCTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

ACAGCCAAATTT

Flanking Amino Acid:

GVCASDRTPSVSSINRVLRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.3

62.3

43.9

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.27

59.6

30.2

Minor 5ss

32.4

-2

2.9

38.2

39.5

Minor BPS

39.4

-0.7

51.52

43.3

Associated Gene:

Gene:

PAX4

Ensembl Gene ID:

ENSAPLG00000020399

Chromosome:

PEDO01010515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033544

2151 - 5887

3737