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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010515.1_5321_5773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5321 - 5773

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGAGCA

5'SS Class:

major

3'SS Sequence:

CCTCCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

ACAGCCTCACCC

Flanking Amino Acid:

ATQLPDTTIRVWFSNRRAKW

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

59.7

39.8

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

76.8

0.6

0.8

68.3

31.9

Minor 5ss

28.9

-2.4

3.5

30.4

42.9

Minor BPS

46.5

-0.2

1.9

53.62

Associated Gene:

Gene:

PAX4

Ensembl Gene ID:

ENSAPLG00000020399

Chromosome:

PEDO01010515.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033544

2151 - 5887

3737