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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010516.1_13782_20722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13782 - 20722

Intron Length:

6941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TACTGTATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTCACCATTACT

Flanking Amino Acid:

QYTVVKEETESSPPSGVFEK

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

76.5

0.6

0.9

39.9

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

55.3

0.25

78.32

43.4

Associated Gene:

Gene:

ARHGAP39

Ensembl Gene ID:

ENSAPLG00000005761

Chromosome:

PEDO01010516.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032565

21 - 21201

21181

ENSAPLT00000005950

21 - 21201

21181