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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010516.1_2162_5750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2162 - 5750

Intron Length:

3589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTGAC

U12 Branch Point Sequence:

GTCCTCGTGACG

Flanking Amino Acid:

RHMDPVNDTKGVAISTYAKY

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

58.8

0.22

1.3

44.3

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

-0.4

2.1

52.07

42.7

Associated Gene:

Gene:

ARHGAP39

Ensembl Gene ID:

ENSAPLG00000005761

Chromosome:

PEDO01010516.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032565

21 - 21201

21181