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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010516.1_881_1014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

881 - 1014

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

AGGAGCTCACCC

Flanking Amino Acid:

VLCYLIRFLQVFVQPANVAV

Intron Amino Acid Position:

1053

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

79.6

0.67

0.7

72.4

32.3

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

40.4

-0.7

2.1

46.52

42.2

Associated Gene:

Gene:

ARHGAP39

Ensembl Gene ID:

ENSAPLG00000005761

Chromosome:

PEDO01010516.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032565

21 - 21201

21181

ENSAPLT00000023861

21 - 21201

21181

ENSAPLT00000005950

21 - 21201

21181