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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010516.1_8820_20722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8820 - 20722

Intron Length:

11903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTTAC

U12 Branch Point Sequence:

CACCCCCTGACC

Flanking Amino Acid:

QYTVVKEETERTSSLRWNAG

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

60.1

0.25

51.3

35.1

Major PPT

75.5

0.57

0.8

66.5

35.6

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

49.4

-0

1.7

57.12

41.5

Associated Gene:

Gene:

ARHGAP39

Ensembl Gene ID:

ENSAPLG00000005761

Chromosome:

PEDO01010516.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023861

21 - 21201

21181