Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010521.1_112_731_F

Intron Information:

Intron Rank:

138762

Intron Class:

major

Intron Phase:

Intron Coordinates:

112 - 731

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACAAAT

5'SS Class:

major

3'SS Sequence:

CTCTACATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTTGCTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

76.8

33.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

76.6

0.6

0.9

69.8

34.9

Minor 5ss

35.2

-1.7

3.1

48.5

47.2

Minor BPS

68.3

0.65

1.5

84.4

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024756

Chromosome:

PEDO01010521.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043294

24 - 1424

1401