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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010553.1_629_1324_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

629 - 1324

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCAAACAAGAAAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTTCTCTTAAAG

Flanking Amino Acid:

KMKKEQRDVENNILSLFYLS

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

78.5

31.6

Major BPS

77.8

0.69

78.2

31.8

Major PPT

45.5

-0.2

1.2

38.4

37.6

Minor 5ss

-0.9

3.3

55.6

43.2

Minor BPS

70.4

0.5

1.4

74.05

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010638

Chromosome:

PEDO01010553.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011070

472 - 2765

2294