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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010562.1_4927_5144_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4927 - 5144

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAGGGTGG

5'SS Class:

weak_major

3'SS Sequence:

AGAGCTTGGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

GGAACTTGAAGA

Flanking Amino Acid:

KCALLNGKGSHLGSSGSLGN

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.4

46.4

42.3

Major BPS

65.8

0.39

57.3

39.4

Major PPT

42.1

-0.4

1.7

43.9

Minor 5ss

26.6

-2.7

4.3

41.9

46.1

Minor BPS

46.1

-0.3

1.7

51.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023576

Chromosome:

PEDO01010562.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048410

4130 - 5256

1127