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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010601.1_619_923_R

Intron Information:

Intron Rank:

154601

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

619 - 923

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCCCCAAA

5'SS Class:

weak_major

3'SS Sequence:

GGCCACCAAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAAAAT

U12 Branch Point Sequence:

TTGGCCTCGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.5

56.2

44.7

Major BPS

48.3

-0.1

1.2

53.2

37.3

Major PPT

41.9

-0.4

1.6

36.7

34.3

Minor 5ss

38.6

-1.3

49.2

46.6

Minor BPS

59.6

0.29

1.7

70.57

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030750

Chromosome:

PEDO01010601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037140

21 - 1026

1006