About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010607.1_897_1551_F


Intron Information:

Intron Rank:
146102

Intron Class:
major

Intron Phase:

Intron Coordinates:
897 - 1551

Intron Length:
655

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTATGTGGG

5'SS Class:
major

3'SS Sequence:
TGCCCTACTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAT

U12 Branch Point Sequence:
TGTGCCCTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1
62.5
42.3

Major BPS
79
0.72
1
69
38.9

Major PPT
73.9
0.54
0.9
70.2
35

Minor 5ss
39.9
-1.1
3.1
48.5
42.1

Minor BPS
49.6
0.05
2
73.17
43.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01010607.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 1853
1833