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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010633.1_1245_1436_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1245 - 1436

Intron Length:
192

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGGCTT

5'SS Class:
major

3'SS Sequence:
CCCCTTCTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTCAC

U12 Branch Point Sequence:
TCGGTGTCACCT

Flanking Amino Acid:
SEVLYMLKNVRVLGHFEKPL

Intron Amino Acid Position:
104

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1
69.9
42.1

Major BPS
57.2
0.18
1.4
63.1
44.5

Major PPT
76.7
0.6
0.7
71.5
26.5

Minor 5ss
31.7
-2.1
3.5
48.3
47.3

Minor BPS
38.9
-0.7
2.3
54.52
47.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01010633.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

853 - 2093
1241