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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010643.1_863_1815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

863 - 1815

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TGCTGCTGAACG

Flanking Amino Acid:

SIICYYNTYQVVQFNRLPLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

0.42

1.1

57.3

41.7

Major PPT

83.2

0.75

0.8

77.1

31.6

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

52.7

-0

60.99

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003310

Chromosome:

PEDO01010643.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003372

754 - 2790

2037