Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010654.1_252_352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

252 - 352

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

GTGCCATCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TCTGGCTGATGC

Flanking Amino Acid:

YSSHADEHRVKYQCFKSAWM

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

61.5

43.4

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

65.7

0.35

0.9

58.5

37.3

Minor 5ss

32.8

-2

3.3

42.2

38.9

Minor BPS

39.5

-0.8

2.3

50.27

46.5

Associated Gene:

Gene:

ENTPD7

Ensembl Gene ID:

ENSAPLG00000008165

Chromosome:

PEDO01010654.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042940

86 - 2474

2389

ENSAPLT00000008482

86 - 2474

2389