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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010703.1_2799_2966_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2799 - 2966

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTCGAAA

5'SS Class:

weak_major

3'SS Sequence:

CGGGGGCTTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TCGTGTCTATTT

Flanking Amino Acid:

VASSEMRLIVAGKAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.3

59.6

40.6

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

45.2

-0.2

1.7

42.2

43.2

Minor 5ss

39.6

-1.2

2.9

48.9

Minor BPS

42.4

-0.4

2.2

59.44

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031166

Chromosome:

PEDO01010703.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029536

1370 - 2981

1612