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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010705.1_227_1125_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

227 - 1125

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTATCTGG

5'SS Class:

weak_major

3'SS Sequence:

TGCCGCTCTTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TCACCCCAAATC

Flanking Amino Acid:

SYRGCMGTYVAHTSHFPFRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.3

45.5

Major BPS

62.4

0.31

32.1

Major PPT

51.5

0.03

1.7

61.6

Minor 5ss

39.2

-1.2

2.8

40.4

45.4

Minor BPS

46.7

-0.2

57.3

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027841

Chromosome:

PEDO01010705.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022735

159 - 1720

1562