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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010711.1_1730_1835_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1730 - 1835

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATCCCGA

5'SS Class:

weak_minor

3'SS Sequence:

CCTCTTCTGCCAG|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

GACTTCTTAACG

Flanking Amino Acid:

IKEAAQQVRDGAHIIVTPED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.08

1.3

45.4

44.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

74.6

0.55

0.9

68.5

37.3

Minor 5ss

54.6

0.16

2.5

68.6

42.6

Minor BPS

69.5

0.47

1.4

64.92

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027089

Chromosome:

PEDO01010711.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026964

485 - 2013

1529