Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010746.1_2261_2584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2261 - 2584

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

CTACCGCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

GCACCCCTGATG

Flanking Amino Acid:

IFYVTSSDYRVQTTTMCISV

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

39.2

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

68.9

0.42

0.9

58.2

38.2

Minor 5ss

-1.9

3.3

39.7

39.8

Minor BPS

46.3

-0.4

1.7

46.4

40.2

Associated Gene:

Gene:

GRM2

Ensembl Gene ID:

ENSAPLG00000014460

Chromosome:

PEDO01010746.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032086

956 - 7867

6912

ENSAPLT00000015074

956 - 7982

7027