Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_11583_11733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11583 - 11733

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGGTGG

5'SS Class:

major

3'SS Sequence:

TTTAATTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CCCCGTTTAATT

Flanking Amino Acid:

DAPVIHKEMVGGYEGAEPEV

Intron Amino Acid Position:

1169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

55.7

43.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

74.6

0.55

69.2

40.5

Minor 5ss

42.4

-0.8

3.1

52.2

46.9

Minor BPS

48.8

-0

1.8

59.98

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015159

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044911

779 - 17644

16866

ENSAPLT00000015959

2099 - 17644

15546