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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_11830_11959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11830 - 11959

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCAAA

U12 Branch Point Sequence:

AGAATCCAAACC

Flanking Amino Acid:

ARQICKDHVKSLDGSIAKAS

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

53.9

0.1

1.2

62.7

32.2

Major PPT

77.1

0.61

0.9

32.5

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

43.9

-0.4

1.9

51.84

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015159

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044911

779 - 17644

16866

ENSAPLT00000015959

2099 - 17644

15546