Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_15677_15986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15677 - 15986

Intron Length:

310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGGACA

5'SS Class:

major

3'SS Sequence:

CTGCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

TGCCCCGTGACC

Flanking Amino Acid:

LASDLWVTGTRFSYLIGKDT

Intron Amino Acid Position:

1637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

63.6

42.4

Major BPS

48.6

-0

1.2

40.4

Major PPT

70.1

0.45

0.9

61.1

40.1

Minor 5ss

31.6

-2.1

3.3

40.8

45.3

Minor BPS

50.4

-0

2.1

64.12

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015159

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044911

779 - 17644

16866

ENSAPLT00000015959

2099 - 17644

15546