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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_2465_3091_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2465 - 3091

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTCGC

5'SS Class:

major

3'SS Sequence:

AGATGTCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

CCCCTCATGATA

Flanking Amino Acid:

LLHAAPAPAQMVTMVTPALL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

65.2

40.8

Major BPS

72.1

0.55

1.1

44.2

Major PPT

50.7

0.02

1.1

46.1

Minor 5ss

31.6

-2.1

2.9

40.2

38.9

Minor BPS

45.1

-0.3

1.5

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015159

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044911

779 - 17644

16866

ENSAPLT00000015959

2099 - 17644

15546