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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_26535_26617_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26535 - 26617

Intron Length:
83

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGGGCG

5'SS Class:
strong_major

3'SS Sequence:
CCTGGCCTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAG

U12 Branch Point Sequence:
GGTTTTCTAAGC

Flanking Amino Acid:
LGLLYRILYKADPRSPRYGG

Intron Amino Acid Position:
39

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.8
0.89
0.9
70.5
38.9

Major BPS
70.6
0.51
1.5
77.9
34.9

Major PPT
68.7
0.42
0.9
61
35.1

Minor 5ss
29.5
-2.3
3.4
38.5
46.7

Minor BPS
47.9
-0.1
1.9
59.91
39.2

Associated Gene:

Gene:
ILVBL

Ensembl Gene ID:

Chromosome:
PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25412 - 30963
5552