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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_27738_27822_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
27738 - 27822

Intron Length:
85

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTGAGCAGC

5'SS Class:
major

3'SS Sequence:
CCCTTCTCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCAAAA

U12 Branch Point Sequence:
CCCTTCTCAACA

Flanking Amino Acid:
ARGFRGKLVQWYLQNYVHNL

Intron Amino Acid Position:
232

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1
64.9
41.1

Major BPS
47.3
-0.1
1
50.8
30.3

Major PPT
73.4
0.53
0.8
68.9
30.2

Minor 5ss
34.4
-1.8
2.9
39.9
40.3

Minor BPS
58
0.25
1.6
62.43
44.3

Associated Gene:

Gene:
ILVBL

Ensembl Gene ID:

Chromosome:
PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25412 - 30963
5552