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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_29774_29855_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
29774 - 29855

Intron Length:
82

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGGACC

5'SS Class:
major

3'SS Sequence:
GTTGTCCTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGACAC

U12 Branch Point Sequence:
ATGCGGGTGACA

Flanking Amino Acid:
PPPPPLLAGPRSLRHAGSWR

Intron Amino Acid Position:
484

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1
66.9
38.5

Major BPS
46
-0.2
1.3
52.4
43.3

Major PPT
76.1
0.59
0.9
69.7
36.7

Minor 5ss
28.6
-2.5
3
36.3
40.5

Minor BPS
36.2
-1
2.7
49.47
41.8

Associated Gene:

Gene:
ILVBL

Ensembl Gene ID:

Chromosome:
PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25412 - 30963
5552