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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_32440_32678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32440 - 32678

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

GCTCTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATCCTGACCG

Flanking Amino Acid:

VLHYLLQAWPAPRSSLAPQI

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

74.9

0.56

0.8

31.5

Minor 5ss

32.9

-2

2.8

31.4

42.5

Minor BPS

60.7

0.2

1.9

69.42

43.5

Associated Gene:

Gene:

SYDE1

Ensembl Gene ID:

ENSAPLG00000030638

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041217

31045 - 35920

4876