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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_32920_33256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32920 - 33256

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

TCCCCGCTGATG

Flanking Amino Acid:

LLDCLPDVEKATLTRLLDHL

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

70.1

0.45

0.8

60.9

35.2

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

40.4

-0.9

2.2

44.19

42.3

Associated Gene:

Gene:

SYDE1

Ensembl Gene ID:

ENSAPLG00000030638

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041217

31045 - 35920

4876