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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_4085_4169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4085 - 4169

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CACGTCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CCATCCCCAACC

Flanking Amino Acid:

VLKTVIVEIKTPDNVIIKQV

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

65.3

0.34

0.9

57.2

33.1

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

49.4

-0

1.9

60.3

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015159

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044911

779 - 17644

16866

ENSAPLT00000015959

2099 - 17644

15546