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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010810.1_9209_9531_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9209 - 9531

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTGGG

5'SS Class:

major

3'SS Sequence:

GACCGCCGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTGAA

U12 Branch Point Sequence:

TGAGCTTGAACC

Flanking Amino Acid:

VLAVSLSKKKGLCVADPYEI

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

59.7

45.2

Major BPS

56.9

0.17

1.3

51.3

44.2

Major PPT

58.6

0.19

50.2

Minor 5ss

37.7

-1.4

3.1

40.1

Minor BPS

57.5

0.21

1.6

64.92

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015159

Chromosome:

PEDO01010810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044911

779 - 17644

16866

ENSAPLT00000015959

2099 - 17644

15546