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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010846.1_4336_4991_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4336 - 4991

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCCTGGAGG

5'SS Class:

major

3'SS Sequence:

GAGAAACAAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAAAA

U12 Branch Point Sequence:

GCCTGCAAAACC

Flanking Amino Acid:

CPRPGSQEHRGAGIGEICGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.3

52.5

44.3

Major BPS

52.9

0.07

1.1

59.3

35.9

Major PPT

38.7

-0.6

1.6

26.8

35.7

Minor 5ss

22.4

-3.2

3.7

22.3

37.3

Minor BPS

42.5

-0.5

2.2

51.51

45.6

Associated Gene:

Gene:

PIGS

Ensembl Gene ID:

ENSAPLG00000004653

Chromosome:

PEDO01010846.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021723

1930 - 5143

3214