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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010852.1_2484_3265_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2484 - 3265

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCCAGCTAT

5'SS Class:

weak_major

3'SS Sequence:

GTGTGGAGTTAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTTGACTAAAGC

Flanking Amino Acid:

CVMQYVECQVMWFGNCSLFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

50.8

42.9

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

49.4

-0

1.2

49.6

47.3

Minor 5ss

32.8

-2

4.1

52.9

44.9

Minor BPS

48.2

-0.1

2.2

66.9

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010628

Chromosome:

PEDO01010852.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011077

1750 - 3461

1712