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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010882.1_2587_2688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2587 - 2688

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCGCTTTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GGTGCCTCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

67.5

0.39

60.1

40.4

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

49.7

0.06

69.89

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013558

Chromosome:

PEDO01010882.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018960

165 - 2731

2567

ENSAPLT00000014124

21 - 2768

2748