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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010882.1_593_999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

593 - 999

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGCGCCCTGACC

Flanking Amino Acid:

GICIYCLVHTDLRRRVPKQV

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

51.8

0.04

1.8

63.35

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013558

Chromosome:

PEDO01010882.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017765

21 - 2768

2748

ENSAPLT00000014124

21 - 2768

2748