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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010938.1_1621_4942_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1621 - 4942

Intron Length:

3322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

AGATCCTGACCT

Flanking Amino Acid:

GYPIKAPKLPGLGPGGIGAG

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

70.6

41.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

36.7

-1.5

3.3

50.2

46.4

Minor BPS

57.2

0.31

1.8

73.5

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027386

Chromosome:

PEDO01010938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044395

923 - 9068

8146