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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010938.1_5588_5675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5588 - 5675

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GCTACCCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

ACACCCCTGACT

Flanking Amino Acid:

PGVGVVPGAGVGGPAAAAAA

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

60.8

0.24

54.7

36.4

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

0.21

1.7

68.94

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027386

Chromosome:

PEDO01010938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044395

923 - 9068

8146

ENSAPLT00000032289

21 - 9068

9048