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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010946.1_1380_2310_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1380 - 2310

Intron Length:
931

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTAGTGGG

5'SS Class:
strong_major

3'SS Sequence:
CCCATCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTAAC

U12 Branch Point Sequence:
CCCCCCCTAACC

Flanking Amino Acid:
LLLHLKRGLSRYAGALAQAV

Intron Amino Acid Position:
289

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.9
0.73
1.1
68.2
42.9

Major BPS
59.7
0.24
1.1
61.2
32.6

Major PPT
68
0.41
0.8
61.2
29

Minor 5ss
28.4
-2.5
2.9
32.7
42

Minor BPS
53.5
0.09
1.8
60.5
44.7

Associated Gene:

Gene:
ABHD15

Ensembl Gene ID:

Chromosome:
PEDO01010946.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2852
2832