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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010952.1_196_370_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
196 - 370

Intron Length:
175

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAG|GCTGCTGAG

5'SS Class:
major

3'SS Sequence:
CTCTGCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAA

U12 Branch Point Sequence:
CTCTGCTGAATT

Flanking Amino Acid:
KSWEGGRKGLDSRGFLIG

Intron Amino Acid Position:
9

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.3
0.36
1.3
55.6
46.4

Major BPS
67
0.42
1.1
57.3
41.7

Major PPT
71.1
0.48
0.8
61.7
35

Minor 5ss
22.2
-3.2
3.9
31.3
43

Minor BPS
54.5
0.22
1.9
72.16
45.3

Associated Gene:

Gene:
APRT

Ensembl Gene ID:

Chromosome:
PEDO01010952.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

171 - 1666
1496