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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010952.1_4250_4351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4250 - 4351

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGAAAT

5'SS Class:

major

3'SS Sequence:

TTCCACCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TGCTTTTCCACC

Flanking Amino Acid:

AESFPTQMTAGEMEKHLRLF

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

71.6

40.1

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

72.6

0.51

0.8

66.5

29.4

Minor 5ss

33.3

-1.9

3.3

40.2

45.6

Minor BPS

46.8

-0.2

1.9

58.24

41.2

Associated Gene:

Gene:

CDT1

Ensembl Gene ID:

ENSAPLG00000006936

Chromosome:

PEDO01010952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007199

2337 - 6358

4022