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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010952.1_4554_4647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4554 - 4647

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TTCTCCTCCCTC

Flanking Amino Acid:

KGVSQELLERIRAKEARKLQ

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

83.1

30.9

Major BPS

0.22

1.2

52.4

43.3

Major PPT

69.6

0.44

0.8

60.5

29.4

Minor 5ss

31.5

-2.1

2.7

41.5

Minor BPS

38.6

-0.8

3.6

61.86

44.3

Associated Gene:

Gene:

CDT1

Ensembl Gene ID:

ENSAPLG00000006936

Chromosome:

PEDO01010952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007199

2337 - 6358

4022