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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010952.1_4783_5159_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4783 - 5159

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

ACATCATGAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TCTTCCACATCA

Flanking Amino Acid:

STARGMMIPKMEKALANLAL

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

66.8

0.42

1.1

37.7

Major PPT

57.2

0.16

1.1

52.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

49.3

-0

2.1

68.7

43.4

Associated Gene:

Gene:

CDT1

Ensembl Gene ID:

ENSAPLG00000006936

Chromosome:

PEDO01010952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007199

2337 - 6358

4022