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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010952.1_5349_5573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5349 - 5573

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CGCTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATGAAC

U12 Branch Point Sequence:

CGTGGGTGCAGT

Flanking Amino Acid:

LVNIVKQHHAAFLAGLTPPM

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

47.8

-0.1

1.3

36.4

Major PPT

72.2

0.5

0.8

61.9

34.9

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

29.1

-1.5

2.6

44.32

46.3

Associated Gene:

Gene:

CDT1

Ensembl Gene ID:

ENSAPLG00000006936

Chromosome:

PEDO01010952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007199

2337 - 6358

4022