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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010952.1_5944_6208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5944 - 6208

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

GCTGCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GGTTTCTGAGCT

Flanking Amino Acid:

VKQGVQDMMRKQFEERHVGQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

0.9

68.6

39.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

72.1

0.5

64.7

41.3

Minor 5ss

35.9

-1.6

2.8

40.5

39.9

Minor BPS

56.7

0.29

1.7

74.55

41.7

Associated Gene:

Gene:

CDT1

Ensembl Gene ID:

ENSAPLG00000006936

Chromosome:

PEDO01010952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007199

2337 - 6358

4022