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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010969.1_10170_10472_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10170 - 10472

Intron Length:
303

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGACTC

5'SS Class:
strong_major

3'SS Sequence:
CCCTGCATTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTCAT

U12 Branch Point Sequence:
TCTCCCTGCATT

Flanking Amino Acid:
QRPERHQSKQHQSRAKATVA

Intron Amino Acid Position:
470

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.7
0.77
0.9
71.6
38.5

Major BPS
79.8
0.74
0.9
81.3
29.9

Major PPT
72.6
0.51
0.9
65.2
34.8

Minor 5ss
42.6
-0.8
3.1
59.4
45.3

Minor BPS
53
0.17
1.9
74.16
42.9

Associated Gene:

Gene:
M1AP

Ensembl Gene ID:

Chromosome:
PEDO01010969.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10029 - 31529
21501