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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010969.1_22197_24821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22197 - 24821

Intron Length:

2625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CAGTCTGTAATT

Flanking Amino Acid:

VGGSTNSSVEIIILTSQSGK

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

80.7

0.69

0.9

77.4

41.2

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

0.14

68.12

43.7

Associated Gene:

Gene:

M1AP

Ensembl Gene ID:

ENSAPLG00000003560

Chromosome:

PEDO01010969.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017844

9849 - 30121

20273

ENSAPLT00000003624

10029 - 31529

21501