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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011015.1_1249_1991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1249 - 1991

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATATTGATACCC

Flanking Amino Acid:

RKVKTLKGKKGKRKSIAIVV

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

81.9

0.72

0.8

77.3

31.4

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

42.6

-0.5

2.4

57.96

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011848

Chromosome:

PEDO01011015.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042561

145 - 2992

2848

ENSAPLT00000012322

558 - 2992

2435